genomic sequence set [GENO_0000872]
A set of genomic sequences (a biological sequence that is of genomic origin). A ‘genomic sequence set’ differs from a ‘genomic feature set’ in that we are counting how many copies of the same sequence exist in a genome, as opposed to how many of the same sequence feature. ‘Genomic sequence sets’ are useful for describing things like ‘copy number complements’, which are concerned only with how many copies of a sequence exist in a genome, regardless of the location where these reside. By contrast, ‘genomic feature sets are useful for representing things like ‘single locus complements’, where members are sequence features whose identity is dependent on their location.
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen genomic sequence set in VFB
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/GENO_0000872",
"symbol": "",
"types": [
"Entity",
"Class"
],
"short_form": "GENO_0000872",
"label": "genomic sequence set"
},
"description": [
"A set of genomic sequences (a biological sequence that is of genomic origin)."
],
"comment": [
"A 'genomic *sequence* set' differs from a 'genomic *feature* set' in that we are counting how many copies of the same *sequence* exist in a genome, as opposed to how many of the same *sequence feature*. 'Genomic sequence sets' are useful for describing things like 'copy number complements', which are concerned only with how many copies of a sequence exist in a genome, regardless of the location where these reside. By contrast, 'genomic feature sets are useful for representing things like 'single locus complements', where members are sequence features whose identity is dependent on their location."
]
},
"query": "Get JSON for Class",
"version": "44725ae",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/GENO_0000922",
"types": [
"Entity",
"Class"
],
"short_form": "GENO_0000922",
"label": "biological sequence set"
}
],
"relationships": [],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
"Entity",
"Individual",
"pub"
],
"short_form": "Unattributed",
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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