VFB Content Report

An auto generated report detailing the current types and quantity of images and annotations currently publicly available on VFB. This will update after a new data release.

VFB Content Report 2022-09-29

Report of content found at http://pdb.virtualflybrain.org on Thu, 29 Sep 2022 00:17:18

Ontology Content

Anatomy Classes Publications
All Terms 19538 1516
All Nervous System Parts 13340 1050
All Neurons 9809 771
Characterised Neurons 5945 771
Provisional Neurons 3864 8
All Nervous System Regions 1408 245
Synaptic Neuropils 610 136
Neuron Projection Bundles 583 125
Cell Body Rinds 132 8
Sense Organs 845 150

101224 formal assertions, of which 28194 are SubClassOf assertions and 73030 are other relationship types

88990 formal assertions on nervous system components, of which 21056 are SubClassOf assertions and 67934 are other relationship types

Image Content

168100 total images from 101 datasets
70346 single neuron images of 5830 cell types
48120 images of expression patterns of 17158 drivers
4858 images of expression patterns of 676 split combinations

Annotations

115228 annotations recording 3937 types of anatomical structure that 17201 specific driver lines are expressed in.
98918 annotations recording 2874 parts of the nervous system that 14594 specific driver lines are expressed in.
16896 annotations recording 1835 types of neuron that 4726 specific driver lines are expressed in.
5798 annotations recording 686 types of neuron that 1490 specific split combinations are expressed in.

Connectivity

Neuron Number of Neurons Input/Output Entity Number of Entities Connections
Any neuron (individuals) 28729 Any neuron (individuals) 28729 3462820
Any neuron (individuals) 22590 Region (individuals) 218 299710
Any neuron (classes) 309 Muscle (classes) 248 294
Any neuron (classes) 748 Sense organ (classes) 395 487

Content by Template

Template Name Datasets Images Single Neurons EM Neurons Full Expression Patterns Split Expression Patterns Partial Expression Patterns Painted domains
Adult Head (McKellar2020) 1 18 0 0 0 0 0 0
adult VNS template - Court2018 10 3217 1 0 3193 494 0 22
JRC_FlyEM_Hemibrain 3 43943 43830 43829 0 0 0 114
JRC2018Unisex 65 119480 64817 48038 31655 1632 38796 46
L1 larval CNS ssTEM - Cardona/Janelia 22 3463 3463 3463 0 0 0 0
JRC2018UnisexVNC 21 20604 2030 2029 8314 625 10240 21
adult brain template Ito2014 1 75 1 0 0 0 0 75
L3 CNS template - Wood2018 2 257 2 0 0 0 2 255
adult brain template JFRC2 21 41940 16299 0 25272 600 16127 58