sequence_variation_affecting_transcript [SO_1000049]

Any change in mature, spliced and processed, RNA that results from a change in the corresponding DNA sequence.

sequence_variation_affecting_transcript

ID: SO_1000049

Deprecated

Any change in mature, spliced and processed, RNA that results from a change in the corresponding DNA sequence.

OBSOLETE: This term was deleted as it conflated more than one term. The alteration is separate from the effect.

Alternative Names

Synonym	Scope	Reference
mutation causing partially characterised change in transcript	related synonym
sequence variant causing partially characterised change in transcript	exact synonym
sequence_variant_causing_uncharacterised_change_in_transcript	exact synonym
sequence variation affecting transcript	exact synonym
sequence_variant_causing_partially_characterised_change_in_transcript	exact synonym
mutation affecting transcript	exact synonym
sequence variant causing uncharacterised change in transcript	exact synonym
mutation causing uncharacterised change in transcript	related synonym

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"Entity", "Class", "has_subClass" ], "short_form": "SO_0001576", "unique_facets": [ "Class" ], "label": "transcript_variant" } } ], "xrefs": [], "anatomy_channel_image": [], "pub_syn": [ { "synonym": { "scope": "has_exact_synonym", "label": "sequence variant causing partially characterised change in transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_related_synonym", "label": "mutation causing partially characterised change in transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "sequence variant causing uncharacterised change in transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "sequence_variant_causing_uncharacterised_change_in_transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "sequence_variant_causing_partially_characterised_change_in_transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "mutation affecting transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_exact_synonym", "label": "sequence variation affecting transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } }, { "synonym": { "scope": "has_related_synonym", "label": "mutation causing uncharacterised change in transcript", "type": "" }, "pub": { "core": { "symbol": "", "iri": "http://flybase.org/reports/Unattributed", "types": [ "Entity", "Individual", "pub" ], "short_form": "Unattributed", "unique_facets": [ "pub" ], "label": "" }, "FlyBase": "", "PubMed": "", "DOI": "" } } ], "def_pubs": [] }

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