genomic sequence [GENO_0000960]

A biological sequence that is of genomic origin (i.e. carries sequence from the genome of a cell or organism). A sequence being ‘of genomic origin’ here means only that it has been located to the genome of some organism by alignment with some reference genomic sequence. This is because the sequence was originally identified in, or artificially created to replicate, sequence from an organism’s genome.

Open genomic sequence in VFB

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/GENO_0000960",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "GENO_0000960",
            "label": "genomic sequence"
        },
        "description": [
            "A biological sequence that is of genomic origin (i.e. carries sequence from the genome of a cell or organism)."
        ],
        "comment": [
            "A sequence being 'of genomic origin' here means only that it has been located to the genome of some organism by alignment with some reference genomic sequence. This is because the sequence was originally identified in, or artificially created to replicate, sequence from an organism's genome."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/GENO_0000702",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "GENO_0000702",
            "label": "biological sequence"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/GENO_0000251",
                "label": "is_sequence_of",
                "type": "is_sequence_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/GENO_0000481",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "GENO_0000481",
                "label": "genomic feature"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}