EM FAFB Marin et al 2020 [Marin2020]

FAFB EM reconstructed neurons from Marin et al 2020

Open EM FAFB Marin et al 2020 in VFB

Example Images

EM FAFB Marin et al 2020 EM FAFB Marin et al 2020 EM FAFB Marin et al 2020 EM FAFB Marin et al 2020 EM FAFB Marin et al 2020

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://virtualflybrain.org/data/Marin2020",
            "symbol": "",
            "types": [
                "Entity",
                "DataSet",
                "Individual"
            ],
            "short_form": "Marin2020",
            "label": "EM FAFB Marin et al 2020"
        },
        "link": "",
        "description": [
            "FAFB EM reconstructed neurons from Marin et al 2020"
        ],
        "comment": []
    },
    "query": "Get JSON for DataSet",
    "version": "44725ae",
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001011ul",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_001011ul",
                "label": "KCg-s2L (FAFB:8853436)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/11ul/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001011ul",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001011ul",
                    "label": "KCg-s2L (skeleton_id:8853436)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001011sw",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "Sensory_neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_001011sw",
                "label": "VP2RNr#2 (FAFB:5038422)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/11sw/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001011sw",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001011sw",
                    "label": "VP2RNr#2 (skeleton_id:5038422)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001011qq",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Cholinergic",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_001011qq",
                "label": "Multiglomerular mALT lPN bilateral#R2 (FAFB:57434)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/11qq/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001011qq",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001011qq",
                    "label": "Multiglomerular mALT lPN bilateral#R2 (skeleton_id:57434)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001011r1",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "has_image",
                    "has_neuron_connectivity"
                ],
                "short_form": "VFB_001011r1",
                "label": "KCa'b'-ap1_R#9 (FAFB:478805)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/11r1/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001011r1",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001011r1",
                    "label": "KCa'b'-ap1_R#9 (skeleton_id:478805)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_001011xi",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Cell",
                    "Individual",
                    "NBLAST",
                    "Nervous_system",
                    "Neuron",
                    "Sensory_neuron",
                    "has_image"
                ],
                "short_form": "VFB_001011xi",
                "label": "VP4RNl#7 (FAFB:12819089)"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00101567",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00101567",
                        "label": "JRC2018Unisex_c"
                    },
                    "index": [],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00101567",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00101567",
                        "label": "JRC2018Unisex"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/11xi/VFB_00101567/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_001011xi",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_001011xi",
                    "label": "VP4RNl#7 (skeleton_id:12819089)_c"
                },
                "imaging_technique": {
                    "symbol": "TEM",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000258",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000258",
                    "label": "transmission electron microscopy (TEM)"
                }
            }
        }
    ],
    "xrefs": [],
    "license": [
        {
            "core": {
                "symbol": "",
                "iri": null,
                "types": null,
                "short_form": null,
                "label": ""
            },
            "icon": "",
            "link": ""
        }
    ],
    "pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "https://doi.org/10.1016/j.cub.2020.06.028",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "doi_10_1016_j_cub_2020_06_028",
                "label": "Marin et al., 2020"
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": "10.1016/j.cub.2020.06.028"
        }
    ],
    "dataset_counts": {
        "images": 300,
        "types": 91
    }
}